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Cluster: HRGMv2_1436_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1436_24 HRGMv2_1436_24_26 24639 25082 + 4.A.6.1.16
pfam HRGMv2_1436_24 HRGMv2_1436_24_27 25082 25363 + YajC
TC HRGMv2_1436_24 HRGMv2_1436_24_28 25400 25882 + 4.A.6.1.4
TC HRGMv2_1436_24 HRGMv2_1436_24_29 25973 26773 + 4.A.6.1.4
TC HRGMv2_1436_24 HRGMv2_1436_24_30 26763 27845 + 4.A.6.1.4
TF HRGMv2_1436_24 HRGMv2_1436_24_31 28031 28762 + GntR
STP HRGMv2_1436_24 HRGMv2_1436_24_32 28877 30043 + SIS | SIS
CAZyme HRGMv2_1436_24 HRGMv2_1436_24_33 30161 31330 + CE9
Gene ID: HRGMv2_1436_24_26
Type: TC
Location: 24639 - 25082 (+)
Gene ID: HRGMv2_1436_24_27
Type: pfam
Location: 25082 - 25363 (+)
Gene ID: HRGMv2_1436_24_28
Type: TC
Location: 25400 - 25882 (+)
Gene ID: HRGMv2_1436_24_29
Type: TC
Location: 25973 - 26773 (+)
Gene ID: HRGMv2_1436_24_30
Type: TC
Location: 26763 - 27845 (+)
Gene ID: HRGMv2_1436_24_31
Type: TF
Location: 28031 - 28762 (+)
Gene ID: HRGMv2_1436_24_32
Type: STP
Location: 28877 - 30043 (+)
Gene ID: HRGMv2_1436_24_33
Type: CAZyme
Location: 30161 - 31330 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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