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Cluster: HRGMv2_1436_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1436_19 HRGMv2_1436_19_5 4842 6536 + 4.A.3.1.1
pfam HRGMv2_1436_19 HRGMv2_1436_19_6 7078 8310 - Fic
CAZyme HRGMv2_1436_19 HRGMv2_1436_19_7 8678 10099 - GH1
TC HRGMv2_1436_19 HRGMv2_1436_19_8 10177 11955 - 4.A.3.1.1
TF HRGMv2_1436_19 HRGMv2_1436_19_9 12231 13241 + LacI
CAZyme HRGMv2_1436_19 HRGMv2_1436_19_10 13516 14955 - GH1
TC HRGMv2_1436_19 HRGMv2_1436_19_11 15022 16797 - 4.A.3.1.1
TF HRGMv2_1436_19 HRGMv2_1436_19_12 17155 18159 + LacI
TC HRGMv2_1436_19 HRGMv2_1436_19_13 18374 18712 + 4.A.3.1.2
Gene ID: HRGMv2_1436_19_5
Type: TC
Location: 4842 - 6536 (+)
Gene ID: HRGMv2_1436_19_6
Type: pfam
Location: 7078 - 8310 (-)
Gene ID: HRGMv2_1436_19_7
Type: CAZyme
Location: 8678 - 10099 (-)
Gene ID: HRGMv2_1436_19_8
Type: TC
Location: 10177 - 11955 (-)
Gene ID: HRGMv2_1436_19_9
Type: TF
Location: 12231 - 13241 (+)
Gene ID: HRGMv2_1436_19_10
Type: CAZyme
Location: 13516 - 14955 (-)
Gene ID: HRGMv2_1436_19_11
Type: TC
Location: 15022 - 16797 (-)
Gene ID: HRGMv2_1436_19_12
Type: TF
Location: 17155 - 18159 (+)
Gene ID: HRGMv2_1436_19_13
Type: TC
Location: 18374 - 18712 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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