dbCAN Logo

Cluster: HRGMv2_1436_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1436_1 HRGMv2_1436_1_130 140314 141690 - GH13_20
TC HRGMv2_1436_1 HRGMv2_1436_1_131 141844 143040 - 2.A.1.2.18
TC HRGMv2_1436_1 HRGMv2_1436_1_132 143165 145525 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1436_1 HRGMv2_1436_1_133 145647 145967 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1436_1 HRGMv2_1436_1_134 146015 146914 - S09.UPW
TC HRGMv2_1436_1 HRGMv2_1436_1_135 147083 147724 + 4.A.1.2.6
pfam HRGMv2_1436_1 HRGMv2_1436_1_136 147905 149308 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1436_1 HRGMv2_1436_1_137 149558 150343 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1436_1 HRGMv2_1436_1_138 150504 151484 + 3.A.1.34.1
TC HRGMv2_1436_1 HRGMv2_1436_1_139 151688 152611 + 3.A.1.34.1
TC HRGMv2_1436_1 HRGMv2_1436_1_140 152604 153398 + 3.A.1.34.1
Gene ID: HRGMv2_1436_1_130
Type: CAZyme
Location: 140314 - 141690 (-)
Gene ID: HRGMv2_1436_1_131
Type: TC
Location: 141844 - 143040 (-)
Gene ID: HRGMv2_1436_1_132
Type: TC
Location: 143165 - 145525 (-)
Gene ID: HRGMv2_1436_1_133
Type:
Location: 145647 - 145967 (-)
Gene ID: HRGMv2_1436_1_134
Type: peptidase
Location: 146015 - 146914 (-)
Gene ID: HRGMv2_1436_1_135
Type: TC
Location: 147083 - 147724 (+)
Gene ID: HRGMv2_1436_1_136
Type: pfam
Location: 147905 - 149308 (+)
Gene ID: HRGMv2_1436_1_137
Type:
Location: 149558 - 150343 (+)
Gene ID: HRGMv2_1436_1_138
Type: TC
Location: 150504 - 151484 (+)
Gene ID: HRGMv2_1436_1_139
Type: TC
Location: 151688 - 152611 (+)
Gene ID: HRGMv2_1436_1_140
Type: TC
Location: 152604 - 153398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List