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Cluster: HRGMv2_1435_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1435_15 HRGMv2_1435_15_10 13593 15275 + 2.A.66.4.4
pfam HRGMv2_1435_15 HRGMv2_1435_15_11 15282 17222 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1435_15 HRGMv2_1435_15_12 17588 19201 + 3.A.1.5.27
TC HRGMv2_1435_15 HRGMv2_1435_15_13 19357 20313 + 3.A.1.5.38
TC HRGMv2_1435_15 HRGMv2_1435_15_14 20317 22332 + 3.A.1.5.25
TC HRGMv2_1435_15 HRGMv2_1435_15_15 22333 23160 + 3.A.1.5.27
CAZyme HRGMv2_1435_15 HRGMv2_1435_15_16 23292 24218 + CE7
Gene ID: HRGMv2_1435_15_10
Type: TC
Location: 13593 - 15275 (+)
Gene ID: HRGMv2_1435_15_11
Type: pfam
Location: 15282 - 17222 (+)
Gene ID: HRGMv2_1435_15_12
Type: TC
Location: 17588 - 19201 (+)
Gene ID: HRGMv2_1435_15_13
Type: TC
Location: 19357 - 20313 (+)
Gene ID: HRGMv2_1435_15_14
Type: TC
Location: 20317 - 22332 (+)
Gene ID: HRGMv2_1435_15_15
Type: TC
Location: 22333 - 23160 (+)
Gene ID: HRGMv2_1435_15_16
Type: CAZyme
Location: 23292 - 24218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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