dbCAN Logo

Cluster: HRGMv2_1435_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1435_10 HRGMv2_1435_10_34 37230 39566 - 3.A.3.5.15
STP HRGMv2_1435_10 HRGMv2_1435_10_35 40057 42141 - Pkinase
STP HRGMv2_1435_10 HRGMv2_1435_10_36 42313 43275 - FHA
TC HRGMv2_1435_10 HRGMv2_1435_10_37 43865 46126 + 1.I.1.1.3
STP HRGMv2_1435_10 HRGMv2_1435_10_38 46748 47509 + Fer4
TC HRGMv2_1435_10 HRGMv2_1435_10_39 47790 48302 + 4.A.1.2.5
pfam HRGMv2_1435_10 HRGMv2_1435_10_40 48321 48977 + PRD | CAT_RBD
TC HRGMv2_1435_10 HRGMv2_1435_10_41 49275 50891 + 4.A.1.1.3
CAZyme HRGMv2_1435_10 HRGMv2_1435_10_42 50895 52277 + GH4
Gene ID: HRGMv2_1435_10_34
Type: TC
Location: 37230 - 39566 (-)
Gene ID: HRGMv2_1435_10_35
Type: STP
Location: 40057 - 42141 (-)
Gene ID: HRGMv2_1435_10_36
Type: STP
Location: 42313 - 43275 (-)
Gene ID: HRGMv2_1435_10_37
Type: TC
Location: 43865 - 46126 (+)
Gene ID: HRGMv2_1435_10_38
Type: STP
Location: 46748 - 47509 (+)
Gene ID: HRGMv2_1435_10_39
Type: TC
Location: 47790 - 48302 (+)
Gene ID: HRGMv2_1435_10_40
Type: pfam
Location: 48321 - 48977 (+)
Gene ID: HRGMv2_1435_10_41
Type: TC
Location: 49275 - 50891 (+)
Gene ID: HRGMv2_1435_10_42
Type: CAZyme
Location: 50895 - 52277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List