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Cluster: HRGMv2_1435_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1435_37 HRGMv2_1435_37_2 1179 2495 + 3.A.1.1.45
TC HRGMv2_1435_37 HRGMv2_1435_37_3 2583 3437 + 3.A.1.1.45
TC HRGMv2_1435_37 HRGMv2_1435_37_4 3437 4276 + 3.A.1.1.45
TC HRGMv2_1435_37 HRGMv2_1435_37_5 4345 5544 + 3.A.1.1.22
CAZyme HRGMv2_1435_37 HRGMv2_1435_37_6 6001 8268 - GT35
CAZyme HRGMv2_1435_37 HRGMv2_1435_37_7 8397 9902 - GH77
Gene ID: HRGMv2_1435_37_2
Type: TC
Location: 1179 - 2495 (+)
Gene ID: HRGMv2_1435_37_3
Type: TC
Location: 2583 - 3437 (+)
Gene ID: HRGMv2_1435_37_4
Type: TC
Location: 3437 - 4276 (+)
Gene ID: HRGMv2_1435_37_5
Type: TC
Location: 4345 - 5544 (+)
Gene ID: HRGMv2_1435_37_6
Type: CAZyme
Location: 6001 - 8268 (-)
Gene ID: HRGMv2_1435_37_7
Type: CAZyme
Location: 8397 - 9902 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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