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Cluster: HRGMv2_1435_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1435_27 HRGMv2_1435_27_10 9038 10396 - 2.A.33.1.1
pfam HRGMv2_1435_27 HRGMv2_1435_27_11 10664 11587 - DHH | DHHA2
STP HRGMv2_1435_27 HRGMv2_1435_27_12 11754 12707 - Glucokinase
TC HRGMv2_1435_27 HRGMv2_1435_27_13 12949 13281 - 4.A.3.2.3
TC HRGMv2_1435_27 HRGMv2_1435_27_14 13291 13593 - 4.A.3.2.9
TC HRGMv2_1435_27 HRGMv2_1435_27_15 13747 15099 - 4.A.3.2.2
CAZyme HRGMv2_1435_27 HRGMv2_1435_27_16 15220 16620 - GH1
Gene ID: HRGMv2_1435_27_10
Type: TC
Location: 9038 - 10396 (-)
Gene ID: HRGMv2_1435_27_11
Type: pfam
Location: 10664 - 11587 (-)
Gene ID: HRGMv2_1435_27_12
Type: STP
Location: 11754 - 12707 (-)
Gene ID: HRGMv2_1435_27_13
Type: TC
Location: 12949 - 13281 (-)
Gene ID: HRGMv2_1435_27_14
Type: TC
Location: 13291 - 13593 (-)
Gene ID: HRGMv2_1435_27_15
Type: TC
Location: 13747 - 15099 (-)
Gene ID: HRGMv2_1435_27_16
Type: CAZyme
Location: 15220 - 16620 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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