dbCAN Logo

Cluster: HRGMv2_1434_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1434_25 HRGMv2_1434_25_38 36530 37888 - 2.A.33.1.1
pfam HRGMv2_1434_25 HRGMv2_1434_25_39 38156 39079 - DHH | DHHA2
STP HRGMv2_1434_25 HRGMv2_1434_25_40 39246 40199 - Glucokinase
TC HRGMv2_1434_25 HRGMv2_1434_25_41 40441 40773 - 4.A.3.2.3
TC HRGMv2_1434_25 HRGMv2_1434_25_42 40783 41085 - 4.A.3.2.9
TC HRGMv2_1434_25 HRGMv2_1434_25_43 41239 42591 - 4.A.3.2.2
CAZyme HRGMv2_1434_25 HRGMv2_1434_25_44 42712 44112 - GH1
Gene ID: HRGMv2_1434_25_38
Type: TC
Location: 36530 - 37888 (-)
Gene ID: HRGMv2_1434_25_39
Type: pfam
Location: 38156 - 39079 (-)
Gene ID: HRGMv2_1434_25_40
Type: STP
Location: 39246 - 40199 (-)
Gene ID: HRGMv2_1434_25_41
Type: TC
Location: 40441 - 40773 (-)
Gene ID: HRGMv2_1434_25_42
Type: TC
Location: 40783 - 41085 (-)
Gene ID: HRGMv2_1434_25_43
Type: TC
Location: 41239 - 42591 (-)
Gene ID: HRGMv2_1434_25_44
Type: CAZyme
Location: 42712 - 44112 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1434_25_42 vegan > omnivore 1.02018 0.00863

🧭 Explore Read Mapping of CGC

← Back to Cluster List