dbCAN Logo

Cluster: HRGMv2_1434_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1434_44 HRGMv2_1434_44_27 27838 28545 + 1.C.82.1.1
pfam HRGMv2_1434_44 HRGMv2_1434_44_28 28671 29381 - Metallophos | Metallophos_2
pfam HRGMv2_1434_44 HRGMv2_1434_44_29 29378 31294 - Bmp
TC HRGMv2_1434_44 HRGMv2_1434_44_30 31388 32155 - 1.A.23.4.2
TC HRGMv2_1434_44 HRGMv2_1434_44_31 32348 33142 - 3.A.1.34.1
TC HRGMv2_1434_44 HRGMv2_1434_44_32 33135 34058 - 3.A.1.34.1
TC HRGMv2_1434_44 HRGMv2_1434_44_33 34263 35243 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1434_44 HRGMv2_1434_44_34 35404 36192 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1434_44 HRGMv2_1434_44_35 36443 37846 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1434_44 HRGMv2_1434_44_36 38028 38591 - 4.A.1.2.6
peptidase HRGMv2_1434_44 HRGMv2_1434_44_37 38835 39734 + S09.UPW
NULL(UNKNOWN) HRGMv2_1434_44 HRGMv2_1434_44_38 39782 40102 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1434_44 HRGMv2_1434_44_39 40224 42584 + 9.A.8.1.6
TC HRGMv2_1434_44 HRGMv2_1434_44_40 42709 43905 + 2.A.1.2.18
CAZyme HRGMv2_1434_44 HRGMv2_1434_44_41 44059 45435 + GH13_20
Gene ID: HRGMv2_1434_44_27
Type: TC
Location: 27838 - 28545 (+)
Gene ID: HRGMv2_1434_44_28
Type: pfam
Location: 28671 - 29381 (-)
Gene ID: HRGMv2_1434_44_29
Type: pfam
Location: 29378 - 31294 (-)
Gene ID: HRGMv2_1434_44_30
Type: TC
Location: 31388 - 32155 (-)
Gene ID: HRGMv2_1434_44_31
Type: TC
Location: 32348 - 33142 (-)
Gene ID: HRGMv2_1434_44_32
Type: TC
Location: 33135 - 34058 (-)
Gene ID: HRGMv2_1434_44_33
Type: TC
Location: 34263 - 35243 (-)
Gene ID: HRGMv2_1434_44_34
Type:
Location: 35404 - 36192 (-)
Gene ID: HRGMv2_1434_44_35
Type: pfam
Location: 36443 - 37846 (-)
Gene ID: HRGMv2_1434_44_36
Type: TC
Location: 38028 - 38591 (-)
Gene ID: HRGMv2_1434_44_37
Type: peptidase
Location: 38835 - 39734 (+)
Gene ID: HRGMv2_1434_44_38
Type:
Location: 39782 - 40102 (+)
Gene ID: HRGMv2_1434_44_39
Type: TC
Location: 40224 - 42584 (+)
Gene ID: HRGMv2_1434_44_40
Type: TC
Location: 42709 - 43905 (+)
Gene ID: HRGMv2_1434_44_41
Type: CAZyme
Location: 44059 - 45435 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List