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Cluster: HRGMv2_1434_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1434_43 HRGMv2_1434_43_19 21345 22271 - CE7
TC HRGMv2_1434_43 HRGMv2_1434_43_20 22403 23230 - 3.A.1.5.27
TC HRGMv2_1434_43 HRGMv2_1434_43_21 23231 25246 - 3.A.1.5.25
TC HRGMv2_1434_43 HRGMv2_1434_43_22 25250 26206 - 3.A.1.5.38
TC HRGMv2_1434_43 HRGMv2_1434_43_23 26364 27977 - 3.A.1.5.27
pfam HRGMv2_1434_43 HRGMv2_1434_43_24 28342 30282 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1434_43 HRGMv2_1434_43_25 30289 31971 - 2.A.66.4.4
Gene ID: HRGMv2_1434_43_19
Type: CAZyme
Location: 21345 - 22271 (-)
Gene ID: HRGMv2_1434_43_20
Type: TC
Location: 22403 - 23230 (-)
Gene ID: HRGMv2_1434_43_21
Type: TC
Location: 23231 - 25246 (-)
Gene ID: HRGMv2_1434_43_22
Type: TC
Location: 25250 - 26206 (-)
Gene ID: HRGMv2_1434_43_23
Type: TC
Location: 26364 - 27977 (-)
Gene ID: HRGMv2_1434_43_24
Type: pfam
Location: 28342 - 30282 (-)
Gene ID: HRGMv2_1434_43_25
Type: TC
Location: 30289 - 31971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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