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Cluster: HRGMv2_1434_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1434_34 HRGMv2_1434_34_11 14690 17140 - 4.A.1.1.8
TF HRGMv2_1434_34 HRGMv2_1434_34_12 17365 18084 + GntR
TC HRGMv2_1434_34 HRGMv2_1434_34_13 18391 19707 + 3.A.1.1.45
TC HRGMv2_1434_34 HRGMv2_1434_34_14 19795 20649 + 3.A.1.1.45
TC HRGMv2_1434_34 HRGMv2_1434_34_15 20649 21488 + 3.A.1.1.45
TC HRGMv2_1434_34 HRGMv2_1434_34_16 21557 22756 + 3.A.1.1.22
CAZyme HRGMv2_1434_34 HRGMv2_1434_34_17 23213 25480 - GT35
CAZyme HRGMv2_1434_34 HRGMv2_1434_34_18 25609 27114 - GH77
Gene ID: HRGMv2_1434_34_11
Type: TC
Location: 14690 - 17140 (-)
Gene ID: HRGMv2_1434_34_12
Type: TF
Location: 17365 - 18084 (+)
Gene ID: HRGMv2_1434_34_13
Type: TC
Location: 18391 - 19707 (+)
Gene ID: HRGMv2_1434_34_14
Type: TC
Location: 19795 - 20649 (+)
Gene ID: HRGMv2_1434_34_15
Type: TC
Location: 20649 - 21488 (+)
Gene ID: HRGMv2_1434_34_16
Type: TC
Location: 21557 - 22756 (+)
Gene ID: HRGMv2_1434_34_17
Type: CAZyme
Location: 23213 - 25480 (-)
Gene ID: HRGMv2_1434_34_18
Type: CAZyme
Location: 25609 - 27114 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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