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Cluster: HRGMv2_1433_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1433_27 HRGMv2_1433_27_4 4011 5432 - GH1
TC HRGMv2_1433_27 HRGMv2_1433_27_5 5508 7286 - 4.A.3.1.1
TF HRGMv2_1433_27 HRGMv2_1433_27_6 7562 8572 + LacI
CAZyme HRGMv2_1433_27 HRGMv2_1433_27_7 8930 10369 - GH1
TC HRGMv2_1433_27 HRGMv2_1433_27_8 10440 12209 - 4.A.3.1.1
TF HRGMv2_1433_27 HRGMv2_1433_27_9 12565 13569 + LacI
TC HRGMv2_1433_27 HRGMv2_1433_27_10 13784 14122 + 4.A.3.1.2
Gene ID: HRGMv2_1433_27_4
Type: CAZyme
Location: 4011 - 5432 (-)
Gene ID: HRGMv2_1433_27_5
Type: TC
Location: 5508 - 7286 (-)
Gene ID: HRGMv2_1433_27_6
Type: TF
Location: 7562 - 8572 (+)
Gene ID: HRGMv2_1433_27_7
Type: CAZyme
Location: 8930 - 10369 (-)
Gene ID: HRGMv2_1433_27_8
Type: TC
Location: 10440 - 12209 (-)
Gene ID: HRGMv2_1433_27_9
Type: TF
Location: 12565 - 13569 (+)
Gene ID: HRGMv2_1433_27_10
Type: TC
Location: 13784 - 14122 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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