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Cluster: HRGMv2_1433_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1433_19 HRGMv2_1433_19_14 11703 13208 + GH77
CAZyme HRGMv2_1433_19 HRGMv2_1433_19_15 13338 15605 + GT35
TC HRGMv2_1433_19 HRGMv2_1433_19_16 16140 17339 - 3.A.1.1.22
TC HRGMv2_1433_19 HRGMv2_1433_19_17 17408 18247 - 3.A.1.1.45
TC HRGMv2_1433_19 HRGMv2_1433_19_18 18247 19101 - 3.A.1.1.45
TC HRGMv2_1433_19 HRGMv2_1433_19_19 19189 20505 - 3.A.1.1.45
TF HRGMv2_1433_19 HRGMv2_1433_19_20 20812 21531 - GntR
TC HRGMv2_1433_19 HRGMv2_1433_19_21 21759 24209 + 4.A.1.1.8
Gene ID: HRGMv2_1433_19_14
Type: CAZyme
Location: 11703 - 13208 (+)
Gene ID: HRGMv2_1433_19_15
Type: CAZyme
Location: 13338 - 15605 (+)
Gene ID: HRGMv2_1433_19_16
Type: TC
Location: 16140 - 17339 (-)
Gene ID: HRGMv2_1433_19_17
Type: TC
Location: 17408 - 18247 (-)
Gene ID: HRGMv2_1433_19_18
Type: TC
Location: 18247 - 19101 (-)
Gene ID: HRGMv2_1433_19_19
Type: TC
Location: 19189 - 20505 (-)
Gene ID: HRGMv2_1433_19_20
Type: TF
Location: 20812 - 21531 (-)
Gene ID: HRGMv2_1433_19_21
Type: TC
Location: 21759 - 24209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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