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Cluster: HRGMv2_1396_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1396_7 HRGMv2_1396_7_59 61155 62531 - GH13_20
TC HRGMv2_1396_7 HRGMv2_1396_7_60 62685 63881 - 2.A.1.2.18
TC HRGMv2_1396_7 HRGMv2_1396_7_61 64005 66365 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1396_7 HRGMv2_1396_7_62 66487 66807 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1396_7 HRGMv2_1396_7_63 66855 67754 - S09.UPW
TC HRGMv2_1396_7 HRGMv2_1396_7_64 67923 68564 + 4.A.1.2.6
TC HRGMv2_1396_7 HRGMv2_1396_7_65 68800 70734 + 9.B.97.5.1
pfam HRGMv2_1396_7 HRGMv2_1396_7_66 70871 72274 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1396_7 HRGMv2_1396_7_67 72523 73311 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1396_7 HRGMv2_1396_7_68 73471 74451 + 3.A.1.34.1
TC HRGMv2_1396_7 HRGMv2_1396_7_69 74656 75579 + 3.A.1.34.1
TC HRGMv2_1396_7 HRGMv2_1396_7_70 75572 76366 + 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1396_7 HRGMv2_1396_7_71 76283 76525 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1396_7 HRGMv2_1396_7_72 76702 77469 + 1.A.23.4.10
pfam HRGMv2_1396_7 HRGMv2_1396_7_73 77564 79480 + Bmp
pfam HRGMv2_1396_7 HRGMv2_1396_7_74 79477 80187 + Metallophos | Metallophos_2
TC HRGMv2_1396_7 HRGMv2_1396_7_75 80475 81182 - 1.C.82.1.1
Gene ID: HRGMv2_1396_7_59
Type: CAZyme
Location: 61155 - 62531 (-)
Gene ID: HRGMv2_1396_7_60
Type: TC
Location: 62685 - 63881 (-)
Gene ID: HRGMv2_1396_7_61
Type: TC
Location: 64005 - 66365 (-)
Gene ID: HRGMv2_1396_7_62
Type:
Location: 66487 - 66807 (-)
Gene ID: HRGMv2_1396_7_63
Type: peptidase
Location: 66855 - 67754 (-)
Gene ID: HRGMv2_1396_7_64
Type: TC
Location: 67923 - 68564 (+)
Gene ID: HRGMv2_1396_7_65
Type: TC
Location: 68800 - 70734 (+)
Gene ID: HRGMv2_1396_7_66
Type: pfam
Location: 70871 - 72274 (+)
Gene ID: HRGMv2_1396_7_67
Type:
Location: 72523 - 73311 (+)
Gene ID: HRGMv2_1396_7_68
Type: TC
Location: 73471 - 74451 (+)
Gene ID: HRGMv2_1396_7_69
Type: TC
Location: 74656 - 75579 (+)
Gene ID: HRGMv2_1396_7_70
Type: TC
Location: 75572 - 76366 (+)
Gene ID: HRGMv2_1396_7_71
Type:
Location: 76283 - 76525 (-)
Gene ID: HRGMv2_1396_7_72
Type: TC
Location: 76702 - 77469 (+)
Gene ID: HRGMv2_1396_7_73
Type: pfam
Location: 77564 - 79480 (+)
Gene ID: HRGMv2_1396_7_74
Type: pfam
Location: 79477 - 80187 (+)
Gene ID: HRGMv2_1396_7_75
Type: TC
Location: 80475 - 81182 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1396_7_65 vegan > omnivore 1.41228 0.00566
HRGMv2_1396_7_65 vegetarian > omnivore 1.51110 0.03181

🧭 Explore Read Mapping of CGC

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