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Cluster: HRGMv2_1391_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1391_10 HRGMv2_1391_10_56 64834 65172 - 4.A.3.1.2
TF HRGMv2_1391_10 HRGMv2_1391_10_57 65387 66391 - LacI
TC HRGMv2_1391_10 HRGMv2_1391_10_58 66749 68524 + 4.A.3.1.1
CAZyme HRGMv2_1391_10 HRGMv2_1391_10_59 68591 70030 + GH1
TF HRGMv2_1391_10 HRGMv2_1391_10_60 70305 71315 - LacI
TC HRGMv2_1391_10 HRGMv2_1391_10_61 71591 73369 + 4.A.3.1.1
CAZyme HRGMv2_1391_10 HRGMv2_1391_10_62 73445 74866 + GH1
Gene ID: HRGMv2_1391_10_56
Type: TC
Location: 64834 - 65172 (-)
Gene ID: HRGMv2_1391_10_57
Type: TF
Location: 65387 - 66391 (-)
Gene ID: HRGMv2_1391_10_58
Type: TC
Location: 66749 - 68524 (+)
Gene ID: HRGMv2_1391_10_59
Type: CAZyme
Location: 68591 - 70030 (+)
Gene ID: HRGMv2_1391_10_60
Type: TF
Location: 70305 - 71315 (-)
Gene ID: HRGMv2_1391_10_61
Type: TC
Location: 71591 - 73369 (+)
Gene ID: HRGMv2_1391_10_62
Type: CAZyme
Location: 73445 - 74866 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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