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Cluster: HRGMv2_1391_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1391_9 HRGMv2_1391_9_20 18516 19685 - CE9
STP HRGMv2_1391_9 HRGMv2_1391_9_21 19803 20969 - SIS | SIS
TF HRGMv2_1391_9 HRGMv2_1391_9_22 21084 21815 - GntR
TC HRGMv2_1391_9 HRGMv2_1391_9_23 22001 23083 - 4.A.6.1.4
TC HRGMv2_1391_9 HRGMv2_1391_9_24 23073 23873 - 4.A.6.1.4
TC HRGMv2_1391_9 HRGMv2_1391_9_25 23964 24446 - 4.A.6.1.4
pfam HRGMv2_1391_9 HRGMv2_1391_9_26 24483 24764 - YajC
TC HRGMv2_1391_9 HRGMv2_1391_9_27 24764 25207 - 4.A.6.1.16
Gene ID: HRGMv2_1391_9_20
Type: CAZyme
Location: 18516 - 19685 (-)
Gene ID: HRGMv2_1391_9_21
Type: STP
Location: 19803 - 20969 (-)
Gene ID: HRGMv2_1391_9_22
Type: TF
Location: 21084 - 21815 (-)
Gene ID: HRGMv2_1391_9_23
Type: TC
Location: 22001 - 23083 (-)
Gene ID: HRGMv2_1391_9_24
Type: TC
Location: 23073 - 23873 (-)
Gene ID: HRGMv2_1391_9_25
Type: TC
Location: 23964 - 24446 (-)
Gene ID: HRGMv2_1391_9_26
Type: pfam
Location: 24483 - 24764 (-)
Gene ID: HRGMv2_1391_9_27
Type: TC
Location: 24764 - 25207 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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