Cluster: HRGMv2_1391_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1391
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1391_8 | HRGMv2_1391_8_69 | 90953 | 93280 | - | 9.A.8.1.6 |
| TC | HRGMv2_1391_8 | HRGMv2_1391_8_70 | 93404 | 93625 | - | 9.A.8.1.6 |
| STP | HRGMv2_1391_8 | HRGMv2_1391_8_71 | 93666 | 93908 | - | FeoA |
| STP | HRGMv2_1391_8 | HRGMv2_1391_8_72 | 94098 | 94346 | - | PTS-HPr |
| TC | HRGMv2_1391_8 | HRGMv2_1391_8_73 | 94769 | 96232 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | HRGMv2_1391_8 | HRGMv2_1391_8_74 | 96386 | 96841 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1391_8 | HRGMv2_1391_8_75 | 96845 | 99853 | - | GH2 |
Gene ID: HRGMv2_1391_8_69
Type: TC
Location: 90953 - 93280 (-)
Type: TC
Location: 90953 - 93280 (-)
Gene ID: HRGMv2_1391_8_70
Type: TC
Location: 93404 - 93625 (-)
Type: TC
Location: 93404 - 93625 (-)
Gene ID: HRGMv2_1391_8_71
Type: STP
Location: 93666 - 93908 (-)
Type: STP
Location: 93666 - 93908 (-)
Gene ID: HRGMv2_1391_8_72
Type: STP
Location: 94098 - 94346 (-)
Type: STP
Location: 94098 - 94346 (-)
Gene ID: HRGMv2_1391_8_73
Type: TC
Location: 94769 - 96232 (-)
Type: TC
Location: 94769 - 96232 (-)
Gene ID: HRGMv2_1391_8_74
Type:
Location: 96386 - 96841 (-)
Type:
Location: 96386 - 96841 (-)
Gene ID: HRGMv2_1391_8_75
Type: CAZyme
Location: 96845 - 99853 (-)
Type: CAZyme
Location: 96845 - 99853 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902493915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.