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Cluster: HRGMv2_1391_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1391_22 HRGMv2_1391_22_10 13587 15269 + 2.A.66.4.4
pfam HRGMv2_1391_22 HRGMv2_1391_22_11 15276 17216 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1391_22 HRGMv2_1391_22_12 17581 19194 + 3.A.1.5.27
TC HRGMv2_1391_22 HRGMv2_1391_22_13 19350 20306 + 3.A.1.5.38
TC HRGMv2_1391_22 HRGMv2_1391_22_14 20310 22325 + 3.A.1.5.25
TC HRGMv2_1391_22 HRGMv2_1391_22_15 22326 23153 + 3.A.1.5.27
CAZyme HRGMv2_1391_22 HRGMv2_1391_22_16 23285 24211 + CE7
Gene ID: HRGMv2_1391_22_10
Type: TC
Location: 13587 - 15269 (+)
Gene ID: HRGMv2_1391_22_11
Type: pfam
Location: 15276 - 17216 (+)
Gene ID: HRGMv2_1391_22_12
Type: TC
Location: 17581 - 19194 (+)
Gene ID: HRGMv2_1391_22_13
Type: TC
Location: 19350 - 20306 (+)
Gene ID: HRGMv2_1391_22_14
Type: TC
Location: 20310 - 22325 (+)
Gene ID: HRGMv2_1391_22_15
Type: TC
Location: 22326 - 23153 (+)
Gene ID: HRGMv2_1391_22_16
Type: CAZyme
Location: 23285 - 24211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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