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Cluster: HRGMv2_1391_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1391_14 HRGMv2_1391_14_2 678 2354 + 3.A.1.5.35
TC HRGMv2_1391_14 HRGMv2_1391_14_3 2511 3548 + 3.A.1.5.37
TC HRGMv2_1391_14 HRGMv2_1391_14_4 3563 4498 + 3.A.1.5.11
TC HRGMv2_1391_14 HRGMv2_1391_14_5 4501 5592 + 3.A.1.5.34
TC HRGMv2_1391_14 HRGMv2_1391_14_6 5592 6620 + 3.A.1.5.36
STP HRGMv2_1391_14 HRGMv2_1391_14_7 7363 9708 + GAF | SpoIIE
STP HRGMv2_1391_14 HRGMv2_1391_14_8 9790 10536 + STAS
CAZyme HRGMv2_1391_14 HRGMv2_1391_14_9 11281 13014 + GH13_30
Gene ID: HRGMv2_1391_14_2
Type: TC
Location: 678 - 2354 (+)
Gene ID: HRGMv2_1391_14_3
Type: TC
Location: 2511 - 3548 (+)
Gene ID: HRGMv2_1391_14_4
Type: TC
Location: 3563 - 4498 (+)
Gene ID: HRGMv2_1391_14_5
Type: TC
Location: 4501 - 5592 (+)
Gene ID: HRGMv2_1391_14_6
Type: TC
Location: 5592 - 6620 (+)
Gene ID: HRGMv2_1391_14_7
Type: STP
Location: 7363 - 9708 (+)
Gene ID: HRGMv2_1391_14_8
Type: STP
Location: 9790 - 10536 (+)
Gene ID: HRGMv2_1391_14_9
Type: CAZyme
Location: 11281 - 13014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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