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Cluster: HRGMv2_1391_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1391_12 HRGMv2_1391_12_40 46913 47707 - 3.A.1.34.1
TC HRGMv2_1391_12 HRGMv2_1391_12_41 47700 48623 - 3.A.1.34.1
TC HRGMv2_1391_12 HRGMv2_1391_12_42 48827 49807 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1391_12 HRGMv2_1391_12_43 49967 50755 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1391_12 HRGMv2_1391_12_44 51014 52417 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1391_12 HRGMv2_1391_12_45 52599 53162 - 4.A.1.2.6
peptidase HRGMv2_1391_12 HRGMv2_1391_12_46 53406 54308 + S09.UPW
TC HRGMv2_1391_12 HRGMv2_1391_12_47 54673 57033 + 9.A.8.1.6
TC HRGMv2_1391_12 HRGMv2_1391_12_48 57154 58350 + 2.A.1.2.18
CAZyme HRGMv2_1391_12 HRGMv2_1391_12_49 58503 59879 + GH13_20
Gene ID: HRGMv2_1391_12_40
Type: TC
Location: 46913 - 47707 (-)
Gene ID: HRGMv2_1391_12_41
Type: TC
Location: 47700 - 48623 (-)
Gene ID: HRGMv2_1391_12_42
Type: TC
Location: 48827 - 49807 (-)
Gene ID: HRGMv2_1391_12_43
Type:
Location: 49967 - 50755 (-)
Gene ID: HRGMv2_1391_12_44
Type: pfam
Location: 51014 - 52417 (-)
Gene ID: HRGMv2_1391_12_45
Type: TC
Location: 52599 - 53162 (-)
Gene ID: HRGMv2_1391_12_46
Type: peptidase
Location: 53406 - 54308 (+)
Gene ID: HRGMv2_1391_12_47
Type: TC
Location: 54673 - 57033 (+)
Gene ID: HRGMv2_1391_12_48
Type: TC
Location: 57154 - 58350 (+)
Gene ID: HRGMv2_1391_12_49
Type: CAZyme
Location: 58503 - 59879 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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