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Cluster: HRGMv2_1385_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1385_9 HRGMv2_1385_9_41 47447 49789 - 3.A.3.5.15
STP HRGMv2_1385_9 HRGMv2_1385_9_42 50362 52446 - Pkinase
STP HRGMv2_1385_9 HRGMv2_1385_9_43 52618 53580 - FHA
TC HRGMv2_1385_9 HRGMv2_1385_9_44 54161 56410 + 1.I.1.1.3
STP HRGMv2_1385_9 HRGMv2_1385_9_45 57029 57790 + Fer4
TC HRGMv2_1385_9 HRGMv2_1385_9_46 58134 58646 + 4.A.1.2.5
pfam HRGMv2_1385_9 HRGMv2_1385_9_47 58665 59519 + PRD | PRD | CAT_RBD
TC HRGMv2_1385_9 HRGMv2_1385_9_48 59619 61235 + 4.A.1.1.3
CAZyme HRGMv2_1385_9 HRGMv2_1385_9_49 61239 62621 + GH4
Gene ID: HRGMv2_1385_9_41
Type: TC
Location: 47447 - 49789 (-)
Gene ID: HRGMv2_1385_9_42
Type: STP
Location: 50362 - 52446 (-)
Gene ID: HRGMv2_1385_9_43
Type: STP
Location: 52618 - 53580 (-)
Gene ID: HRGMv2_1385_9_44
Type: TC
Location: 54161 - 56410 (+)
Gene ID: HRGMv2_1385_9_45
Type: STP
Location: 57029 - 57790 (+)
Gene ID: HRGMv2_1385_9_46
Type: TC
Location: 58134 - 58646 (+)
Gene ID: HRGMv2_1385_9_47
Type: pfam
Location: 58665 - 59519 (+)
Gene ID: HRGMv2_1385_9_48
Type: TC
Location: 59619 - 61235 (+)
Gene ID: HRGMv2_1385_9_49
Type: CAZyme
Location: 61239 - 62621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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