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Cluster: HRGMv2_1385_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1385_4 HRGMv2_1385_4_105 119728 120495 - 1.A.23.4.10
pfam HRGMv2_1385_4 HRGMv2_1385_4_106 120624 122657 - Metallophos | 5_nucleotid_C
TC HRGMv2_1385_4 HRGMv2_1385_4_107 122730 123524 - 3.A.1.34.1
TC HRGMv2_1385_4 HRGMv2_1385_4_108 123517 124440 - 3.A.1.34.1
TC HRGMv2_1385_4 HRGMv2_1385_4_109 124645 125625 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1385_4 HRGMv2_1385_4_110 125786 126571 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1385_4 HRGMv2_1385_4_111 126830 128233 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1385_4 HRGMv2_1385_4_112 128415 128978 - 4.A.1.2.6
peptidase HRGMv2_1385_4 HRGMv2_1385_4_113 129223 130122 + S09.UPW
NULL(UNKNOWN) HRGMv2_1385_4 HRGMv2_1385_4_114 130170 130490 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1385_4 HRGMv2_1385_4_115 130612 132972 + 9.A.8.1.6
TC HRGMv2_1385_4 HRGMv2_1385_4_116 133097 134293 + 2.A.1.2.18
CAZyme HRGMv2_1385_4 HRGMv2_1385_4_117 134447 135823 + GH13_20
Gene ID: HRGMv2_1385_4_105
Type: TC
Location: 119728 - 120495 (-)
Gene ID: HRGMv2_1385_4_106
Type: pfam
Location: 120624 - 122657 (-)
Gene ID: HRGMv2_1385_4_107
Type: TC
Location: 122730 - 123524 (-)
Gene ID: HRGMv2_1385_4_108
Type: TC
Location: 123517 - 124440 (-)
Gene ID: HRGMv2_1385_4_109
Type: TC
Location: 124645 - 125625 (-)
Gene ID: HRGMv2_1385_4_110
Type:
Location: 125786 - 126571 (-)
Gene ID: HRGMv2_1385_4_111
Type: pfam
Location: 126830 - 128233 (-)
Gene ID: HRGMv2_1385_4_112
Type: TC
Location: 128415 - 128978 (-)
Gene ID: HRGMv2_1385_4_113
Type: peptidase
Location: 129223 - 130122 (+)
Gene ID: HRGMv2_1385_4_114
Type:
Location: 130170 - 130490 (+)
Gene ID: HRGMv2_1385_4_115
Type: TC
Location: 130612 - 132972 (+)
Gene ID: HRGMv2_1385_4_116
Type: TC
Location: 133097 - 134293 (+)
Gene ID: HRGMv2_1385_4_117
Type: CAZyme
Location: 134447 - 135823 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1385_4_106 vegan > omnivore 1.98536 0.00863
HRGMv2_1385_4_106 vegetarian > omnivore 1.41614 0.01054

🧭 Explore Read Mapping of CGC

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