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Cluster: HRGMv2_1385_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1385_15 HRGMv2_1385_15_19 21510 22394 - CE7
TC HRGMv2_1385_15 HRGMv2_1385_15_20 22568 23395 - 3.A.1.5.27
TC HRGMv2_1385_15 HRGMv2_1385_15_21 23396 25411 - 3.A.1.5.25
TC HRGMv2_1385_15 HRGMv2_1385_15_22 25415 26371 - 3.A.1.5.38
TC HRGMv2_1385_15 HRGMv2_1385_15_23 26529 28142 - 3.A.1.5.27
pfam HRGMv2_1385_15 HRGMv2_1385_15_24 28508 30448 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1385_15 HRGMv2_1385_15_25 30455 32137 - 2.A.66.4.4
Gene ID: HRGMv2_1385_15_19
Type: CAZyme
Location: 21510 - 22394 (-)
Gene ID: HRGMv2_1385_15_20
Type: TC
Location: 22568 - 23395 (-)
Gene ID: HRGMv2_1385_15_21
Type: TC
Location: 23396 - 25411 (-)
Gene ID: HRGMv2_1385_15_22
Type: TC
Location: 25415 - 26371 (-)
Gene ID: HRGMv2_1385_15_23
Type: TC
Location: 26529 - 28142 (-)
Gene ID: HRGMv2_1385_15_24
Type: pfam
Location: 28508 - 30448 (-)
Gene ID: HRGMv2_1385_15_25
Type: TC
Location: 30455 - 32137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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