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Cluster: HRGMv2_1255_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1255_3 HRGMv2_1255_3_97 108617 110956 - 3.A.3.5.15
STP HRGMv2_1255_3 HRGMv2_1255_3_98 111287 113371 - Pkinase
STP HRGMv2_1255_3 HRGMv2_1255_3_99 113543 114505 - FHA
TC HRGMv2_1255_3 HRGMv2_1255_3_100 115096 117306 + 1.I.1.1.3
STP HRGMv2_1255_3 HRGMv2_1255_3_101 117928 118689 + Fer4
TC HRGMv2_1255_3 HRGMv2_1255_3_102 119033 119545 + 4.A.1.2.5
pfam HRGMv2_1255_3 HRGMv2_1255_3_103 119552 120418 + PRD | PRD | CAT_RBD
TC HRGMv2_1255_3 HRGMv2_1255_3_104 120518 122134 + 4.A.1.1.3
CAZyme HRGMv2_1255_3 HRGMv2_1255_3_105 122138 123520 + GH4
STP HRGMv2_1255_3 HRGMv2_1255_3_106 123777 125609 + Pyr_redox_2
TC HRGMv2_1255_3 HRGMv2_1255_3_107 125603 127414 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1255_3 HRGMv2_1255_3_108 127417 128472 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1255_3 HRGMv2_1255_3_109 128476 129852 + 3.A.1.17.10
Gene ID: HRGMv2_1255_3_97
Type: TC
Location: 108617 - 110956 (-)
Gene ID: HRGMv2_1255_3_98
Type: STP
Location: 111287 - 113371 (-)
Gene ID: HRGMv2_1255_3_99
Type: STP
Location: 113543 - 114505 (-)
Gene ID: HRGMv2_1255_3_100
Type: TC
Location: 115096 - 117306 (+)
Gene ID: HRGMv2_1255_3_101
Type: STP
Location: 117928 - 118689 (+)
Gene ID: HRGMv2_1255_3_102
Type: TC
Location: 119033 - 119545 (+)
Gene ID: HRGMv2_1255_3_103
Type: pfam
Location: 119552 - 120418 (+)
Gene ID: HRGMv2_1255_3_104
Type: TC
Location: 120518 - 122134 (+)
Gene ID: HRGMv2_1255_3_105
Type: CAZyme
Location: 122138 - 123520 (+)
Gene ID: HRGMv2_1255_3_106
Type: STP
Location: 123777 - 125609 (+)
Gene ID: HRGMv2_1255_3_107
Type: TC
Location: 125603 - 127414 (+)
Gene ID: HRGMv2_1255_3_108
Type:
Location: 127417 - 128472 (+)
Gene ID: HRGMv2_1255_3_109
Type: TC
Location: 128476 - 129852 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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