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Cluster: HRGMv2_1255_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1255_23 HRGMv2_1255_23_4 4508 6013 + GH77
CAZyme HRGMv2_1255_23 HRGMv2_1255_23_5 6142 8409 + GT35
TC HRGMv2_1255_23 HRGMv2_1255_23_6 8784 9983 - 3.A.1.1.22
TC HRGMv2_1255_23 HRGMv2_1255_23_7 10052 10891 - 3.A.1.1.45
TC HRGMv2_1255_23 HRGMv2_1255_23_8 10891 11745 - 3.A.1.1.45
TC HRGMv2_1255_23 HRGMv2_1255_23_9 11833 13149 - 3.A.1.1.45
TF HRGMv2_1255_23 HRGMv2_1255_23_10 13457 14176 - GntR
NULL(UNKNOWN) HRGMv2_1255_23 HRGMv2_1255_23_11 14260 14379 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1255_23 HRGMv2_1255_23_12 14401 16851 + 4.A.1.1.8
Gene ID: HRGMv2_1255_23_4
Type: CAZyme
Location: 4508 - 6013 (+)
Gene ID: HRGMv2_1255_23_5
Type: CAZyme
Location: 6142 - 8409 (+)
Gene ID: HRGMv2_1255_23_6
Type: TC
Location: 8784 - 9983 (-)
Gene ID: HRGMv2_1255_23_7
Type: TC
Location: 10052 - 10891 (-)
Gene ID: HRGMv2_1255_23_8
Type: TC
Location: 10891 - 11745 (-)
Gene ID: HRGMv2_1255_23_9
Type: TC
Location: 11833 - 13149 (-)
Gene ID: HRGMv2_1255_23_10
Type: TF
Location: 13457 - 14176 (-)
Gene ID: HRGMv2_1255_23_11
Type:
Location: 14260 - 14379 (-)
Gene ID: HRGMv2_1255_23_12
Type: TC
Location: 14401 - 16851 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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