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Cluster: HRGMv2_1255_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1255_5 HRGMv2_1255_5_109 118711 119154 + 4.A.6.1.16
pfam HRGMv2_1255_5 HRGMv2_1255_5_110 119154 119435 + YajC
TC HRGMv2_1255_5 HRGMv2_1255_5_111 119472 119954 + 4.A.6.1.4
TC HRGMv2_1255_5 HRGMv2_1255_5_112 120045 120845 + 4.A.6.1.4
TC HRGMv2_1255_5 HRGMv2_1255_5_113 120835 121917 + 4.A.6.1.4
TF HRGMv2_1255_5 HRGMv2_1255_5_114 122102 122833 + GntR
STP HRGMv2_1255_5 HRGMv2_1255_5_115 122948 124114 + SIS | SIS
CAZyme HRGMv2_1255_5 HRGMv2_1255_5_116 124234 125403 + CE9
Gene ID: HRGMv2_1255_5_109
Type: TC
Location: 118711 - 119154 (+)
Gene ID: HRGMv2_1255_5_110
Type: pfam
Location: 119154 - 119435 (+)
Gene ID: HRGMv2_1255_5_111
Type: TC
Location: 119472 - 119954 (+)
Gene ID: HRGMv2_1255_5_112
Type: TC
Location: 120045 - 120845 (+)
Gene ID: HRGMv2_1255_5_113
Type: TC
Location: 120835 - 121917 (+)
Gene ID: HRGMv2_1255_5_114
Type: TF
Location: 122102 - 122833 (+)
Gene ID: HRGMv2_1255_5_115
Type: STP
Location: 122948 - 124114 (+)
Gene ID: HRGMv2_1255_5_116
Type: CAZyme
Location: 124234 - 125403 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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