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Cluster: HRGMv2_1255_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1255_5 HRGMv2_1255_5_78 86467 87867 + GH1
TC HRGMv2_1255_5 HRGMv2_1255_5_79 87988 89331 + 4.A.3.2.9
TC HRGMv2_1255_5 HRGMv2_1255_5_80 89492 89794 + 4.A.3.2.9
TC HRGMv2_1255_5 HRGMv2_1255_5_81 89804 90136 + 4.A.3.2.3
STP HRGMv2_1255_5 HRGMv2_1255_5_82 90378 91331 + Glucokinase
pfam HRGMv2_1255_5 HRGMv2_1255_5_83 91500 92423 + DHH | DHHA2
TC HRGMv2_1255_5 HRGMv2_1255_5_84 92691 94049 + 2.A.33.1.1
Gene ID: HRGMv2_1255_5_78
Type: CAZyme
Location: 86467 - 87867 (+)
Gene ID: HRGMv2_1255_5_79
Type: TC
Location: 87988 - 89331 (+)
Gene ID: HRGMv2_1255_5_80
Type: TC
Location: 89492 - 89794 (+)
Gene ID: HRGMv2_1255_5_81
Type: TC
Location: 89804 - 90136 (+)
Gene ID: HRGMv2_1255_5_82
Type: STP
Location: 90378 - 91331 (+)
Gene ID: HRGMv2_1255_5_83
Type: pfam
Location: 91500 - 92423 (+)
Gene ID: HRGMv2_1255_5_84
Type: TC
Location: 92691 - 94049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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