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Cluster: HRGMv2_1214_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1214_1 HRGMv2_1214_1_530 639061 639768 + 1.C.82.1.1
pfam HRGMv2_1214_1 HRGMv2_1214_1_531 640056 640766 - Metallophos | Metallophos_2
pfam HRGMv2_1214_1 HRGMv2_1214_1_532 640763 642679 - Bmp
TC HRGMv2_1214_1 HRGMv2_1214_1_533 642773 643540 - 1.A.23.4.2
pfam HRGMv2_1214_1 HRGMv2_1214_1_534 643669 645687 - Metallophos | 5_nucleotid_C
TC HRGMv2_1214_1 HRGMv2_1214_1_535 645759 646553 - 3.A.1.34.1
TC HRGMv2_1214_1 HRGMv2_1214_1_536 646546 647469 - 3.A.1.34.1
TC HRGMv2_1214_1 HRGMv2_1214_1_537 647673 648653 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1214_1 HRGMv2_1214_1_538 648814 649602 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1214_1 HRGMv2_1214_1_539 649862 651265 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1214_1 HRGMv2_1214_1_540 651447 652010 - 4.A.1.2.6
peptidase HRGMv2_1214_1 HRGMv2_1214_1_541 652254 653153 + S09.UPW
TC HRGMv2_1214_1 HRGMv2_1214_1_542 653625 655985 + 9.A.8.1.6
TC HRGMv2_1214_1 HRGMv2_1214_1_543 656107 657303 + 2.A.1.2.18
CAZyme HRGMv2_1214_1 HRGMv2_1214_1_544 657458 658831 + GH13_20
Gene ID: HRGMv2_1214_1_530
Type: TC
Location: 639061 - 639768 (+)
Gene ID: HRGMv2_1214_1_531
Type: pfam
Location: 640056 - 640766 (-)
Gene ID: HRGMv2_1214_1_532
Type: pfam
Location: 640763 - 642679 (-)
Gene ID: HRGMv2_1214_1_533
Type: TC
Location: 642773 - 643540 (-)
Gene ID: HRGMv2_1214_1_534
Type: pfam
Location: 643669 - 645687 (-)
Gene ID: HRGMv2_1214_1_535
Type: TC
Location: 645759 - 646553 (-)
Gene ID: HRGMv2_1214_1_536
Type: TC
Location: 646546 - 647469 (-)
Gene ID: HRGMv2_1214_1_537
Type: TC
Location: 647673 - 648653 (-)
Gene ID: HRGMv2_1214_1_538
Type:
Location: 648814 - 649602 (-)
Gene ID: HRGMv2_1214_1_539
Type: pfam
Location: 649862 - 651265 (-)
Gene ID: HRGMv2_1214_1_540
Type: TC
Location: 651447 - 652010 (-)
Gene ID: HRGMv2_1214_1_541
Type: peptidase
Location: 652254 - 653153 (+)
Gene ID: HRGMv2_1214_1_542
Type: TC
Location: 653625 - 655985 (+)
Gene ID: HRGMv2_1214_1_543
Type: TC
Location: 656107 - 657303 (+)
Gene ID: HRGMv2_1214_1_544
Type: CAZyme
Location: 657458 - 658831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1214_1_534 vegan > omnivore 1.83165 0.00566
HRGMv2_1214_1_534 vegetarian > omnivore 1.38269 0.02258

🧭 Explore Read Mapping of CGC

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