dbCAN HGM

Cluster: HRGMv2_1214_CGC14

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1214_1	HRGMv2_1214_1_1477	1705881	1706807	-	CE7
TC	HRGMv2_1214_1	HRGMv2_1214_1_1478	1706939	1707766	-	3.A.1.5.27
TC	HRGMv2_1214_1	HRGMv2_1214_1_1479	1707767	1709782	-	3.A.1.5.25
TC	HRGMv2_1214_1	HRGMv2_1214_1_1480	1709786	1710742	-	3.A.1.5.38
TC	HRGMv2_1214_1	HRGMv2_1214_1_1481	1710898	1712511	-	3.A.1.5.27
pfam	HRGMv2_1214_1	HRGMv2_1214_1_1482	1712877	1714817	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	HRGMv2_1214_1	HRGMv2_1214_1_1483	1714824	1716506	-	2.A.66.4.4

Gene ID: HRGMv2_1214_1_1477
Type: CAZyme
Location: 1705881 - 1706807 (-)

Gene ID: HRGMv2_1214_1_1478
Type: TC
Location: 1706939 - 1707766 (-)

Gene ID: HRGMv2_1214_1_1479
Type: TC
Location: 1707767 - 1709782 (-)

Gene ID: HRGMv2_1214_1_1480
Type: TC
Location: 1709786 - 1710742 (-)

Gene ID: HRGMv2_1214_1_1481
Type: TC
Location: 1710898 - 1712511 (-)

Gene ID: HRGMv2_1214_1_1482
Type: pfam
Location: 1712877 - 1714817 (-)

Gene ID: HRGMv2_1214_1_1483
Type: TC
Location: 1714824 - 1716506 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.