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Cluster: HRGMv2_1214_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1214_1 HRGMv2_1214_1_225 294404 296854 - 4.A.1.1.8
TF HRGMv2_1214_1 HRGMv2_1214_1_226 297084 297803 + GntR
TC HRGMv2_1214_1 HRGMv2_1214_1_227 298110 299426 + 3.A.1.1.45
TC HRGMv2_1214_1 HRGMv2_1214_1_228 299514 300368 + 3.A.1.1.45
TC HRGMv2_1214_1 HRGMv2_1214_1_229 300368 301207 + 3.A.1.1.45
TC HRGMv2_1214_1 HRGMv2_1214_1_230 301276 302475 + 3.A.1.1.22
CAZyme HRGMv2_1214_1 HRGMv2_1214_1_231 302854 305121 - GT35
CAZyme HRGMv2_1214_1 HRGMv2_1214_1_232 305250 306755 - GH77
Gene ID: HRGMv2_1214_1_225
Type: TC
Location: 294404 - 296854 (-)
Gene ID: HRGMv2_1214_1_226
Type: TF
Location: 297084 - 297803 (+)
Gene ID: HRGMv2_1214_1_227
Type: TC
Location: 298110 - 299426 (+)
Gene ID: HRGMv2_1214_1_228
Type: TC
Location: 299514 - 300368 (+)
Gene ID: HRGMv2_1214_1_229
Type: TC
Location: 300368 - 301207 (+)
Gene ID: HRGMv2_1214_1_230
Type: TC
Location: 301276 - 302475 (+)
Gene ID: HRGMv2_1214_1_231
Type: CAZyme
Location: 302854 - 305121 (-)
Gene ID: HRGMv2_1214_1_232
Type: CAZyme
Location: 305250 - 306755 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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