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Cluster: HRGMv2_1203_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1203_7 HRGMv2_1203_7_72 72296 73801 + GH77
CAZyme HRGMv2_1203_7 HRGMv2_1203_7_73 73930 76197 + GT35
TC HRGMv2_1203_7 HRGMv2_1203_7_74 76571 77770 - 3.A.1.1.22
TC HRGMv2_1203_7 HRGMv2_1203_7_75 77839 78678 - 3.A.1.1.45
TC HRGMv2_1203_7 HRGMv2_1203_7_76 78678 79532 - 3.A.1.1.45
TC HRGMv2_1203_7 HRGMv2_1203_7_77 79620 80936 - 3.A.1.1.45
TF HRGMv2_1203_7 HRGMv2_1203_7_78 81243 81962 - GntR
TC HRGMv2_1203_7 HRGMv2_1203_7_79 82192 84642 + 4.A.1.1.8
Gene ID: HRGMv2_1203_7_72
Type: CAZyme
Location: 72296 - 73801 (+)
Gene ID: HRGMv2_1203_7_73
Type: CAZyme
Location: 73930 - 76197 (+)
Gene ID: HRGMv2_1203_7_74
Type: TC
Location: 76571 - 77770 (-)
Gene ID: HRGMv2_1203_7_75
Type: TC
Location: 77839 - 78678 (-)
Gene ID: HRGMv2_1203_7_76
Type: TC
Location: 78678 - 79532 (-)
Gene ID: HRGMv2_1203_7_77
Type: TC
Location: 79620 - 80936 (-)
Gene ID: HRGMv2_1203_7_78
Type: TF
Location: 81243 - 81962 (-)
Gene ID: HRGMv2_1203_7_79
Type: TC
Location: 82192 - 84642 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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