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Cluster: HRGMv2_1203_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1203_21 HRGMv2_1203_21_10 13633 15315 + 2.A.66.4.4
pfam HRGMv2_1203_21 HRGMv2_1203_21_11 15322 17262 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1203_21 HRGMv2_1203_21_12 17628 19241 + 3.A.1.5.27
TC HRGMv2_1203_21 HRGMv2_1203_21_13 19397 20353 + 3.A.1.5.38
TC HRGMv2_1203_21 HRGMv2_1203_21_14 20357 22372 + 3.A.1.5.25
TC HRGMv2_1203_21 HRGMv2_1203_21_15 22373 23200 + 3.A.1.5.27
CAZyme HRGMv2_1203_21 HRGMv2_1203_21_16 23332 24258 + CE7
Gene ID: HRGMv2_1203_21_10
Type: TC
Location: 13633 - 15315 (+)
Gene ID: HRGMv2_1203_21_11
Type: pfam
Location: 15322 - 17262 (+)
Gene ID: HRGMv2_1203_21_12
Type: TC
Location: 17628 - 19241 (+)
Gene ID: HRGMv2_1203_21_13
Type: TC
Location: 19397 - 20353 (+)
Gene ID: HRGMv2_1203_21_14
Type: TC
Location: 20357 - 22372 (+)
Gene ID: HRGMv2_1203_21_15
Type: TC
Location: 22373 - 23200 (+)
Gene ID: HRGMv2_1203_21_16
Type: CAZyme
Location: 23332 - 24258 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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