dbCAN Logo

Cluster: HRGMv2_1203_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1203_18 HRGMv2_1203_18_30 29581 30153 + 4.A.6.1.5
sulfatase HRGMv2_1203_18 HRGMv2_1203_18_31 30480 31532 - S1_4
TF HRGMv2_1203_18 HRGMv2_1203_18_32 31738 32502 + HTH_DeoR
CAZyme HRGMv2_1203_18 HRGMv2_1203_18_33 33075 34496 - GH1
TC HRGMv2_1203_18 HRGMv2_1203_18_34 34572 36350 - 4.A.3.1.1
TF HRGMv2_1203_18 HRGMv2_1203_18_35 36625 37635 + LacI
TC HRGMv2_1203_18 HRGMv2_1203_18_36 37809 39569 - 4.A.3.1.1
CAZyme HRGMv2_1203_18 HRGMv2_1203_18_37 39745 41187 - GH1
TF HRGMv2_1203_18 HRGMv2_1203_18_38 41529 42566 + LacI
CAZyme HRGMv2_1203_18 HRGMv2_1203_18_39 42828 44267 - GH1
TC HRGMv2_1203_18 HRGMv2_1203_18_40 44334 46109 - 4.A.3.1.1
TF HRGMv2_1203_18 HRGMv2_1203_18_41 46437 47471 + LacI
TC HRGMv2_1203_18 HRGMv2_1203_18_42 47686 48024 + 4.A.3.1.2
Gene ID: HRGMv2_1203_18_30
Type: TC
Location: 29581 - 30153 (+)
Gene ID: HRGMv2_1203_18_31
Type: sulfatase
Location: 30480 - 31532 (-)
Gene ID: HRGMv2_1203_18_32
Type: TF
Location: 31738 - 32502 (+)
Gene ID: HRGMv2_1203_18_33
Type: CAZyme
Location: 33075 - 34496 (-)
Gene ID: HRGMv2_1203_18_34
Type: TC
Location: 34572 - 36350 (-)
Gene ID: HRGMv2_1203_18_35
Type: TF
Location: 36625 - 37635 (+)
Gene ID: HRGMv2_1203_18_36
Type: TC
Location: 37809 - 39569 (-)
Gene ID: HRGMv2_1203_18_37
Type: CAZyme
Location: 39745 - 41187 (-)
Gene ID: HRGMv2_1203_18_38
Type: TF
Location: 41529 - 42566 (+)
Gene ID: HRGMv2_1203_18_39
Type: CAZyme
Location: 42828 - 44267 (-)
Gene ID: HRGMv2_1203_18_40
Type: TC
Location: 44334 - 46109 (-)
Gene ID: HRGMv2_1203_18_41
Type: TF
Location: 46437 - 47471 (+)
Gene ID: HRGMv2_1203_18_42
Type: TC
Location: 47686 - 48024 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1203_18_38 vegetarian > omnivore 1.10994 0.01548

🧭 Explore Read Mapping of CGC

← Back to Cluster List