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Cluster: HRGMv2_1190_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1190_2 HRGMv2_1190_2_190 208635 210977 - 3.A.3.5.15
STP HRGMv2_1190_2 HRGMv2_1190_2_191 211550 213751 - Pkinase
STP HRGMv2_1190_2 HRGMv2_1190_2_192 213820 214782 - FHA
TC HRGMv2_1190_2 HRGMv2_1190_2_193 215290 217497 + 1.I.1.1.3
STP HRGMv2_1190_2 HRGMv2_1190_2_194 218116 218877 + Fer4
TC HRGMv2_1190_2 HRGMv2_1190_2_195 219221 219733 + 4.A.1.2.2
pfam HRGMv2_1190_2 HRGMv2_1190_2_196 219752 220606 + PRD | PRD | CAT_RBD
TC HRGMv2_1190_2 HRGMv2_1190_2_197 220706 222322 + 4.A.1.1.3
CAZyme HRGMv2_1190_2 HRGMv2_1190_2_198 222326 223708 + GH4
Gene ID: HRGMv2_1190_2_190
Type: TC
Location: 208635 - 210977 (-)
Gene ID: HRGMv2_1190_2_191
Type: STP
Location: 211550 - 213751 (-)
Gene ID: HRGMv2_1190_2_192
Type: STP
Location: 213820 - 214782 (-)
Gene ID: HRGMv2_1190_2_193
Type: TC
Location: 215290 - 217497 (+)
Gene ID: HRGMv2_1190_2_194
Type: STP
Location: 218116 - 218877 (+)
Gene ID: HRGMv2_1190_2_195
Type: TC
Location: 219221 - 219733 (+)
Gene ID: HRGMv2_1190_2_196
Type: pfam
Location: 219752 - 220606 (+)
Gene ID: HRGMv2_1190_2_197
Type: TC
Location: 220706 - 222322 (+)
Gene ID: HRGMv2_1190_2_198
Type: CAZyme
Location: 222326 - 223708 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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