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Cluster: HRGMv2_1190_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1190_10 HRGMv2_1190_10_60 56087 57592 + GH77
CAZyme HRGMv2_1190_10 HRGMv2_1190_10_61 57721 59988 + GT35
TC HRGMv2_1190_10 HRGMv2_1190_10_62 60444 61643 - 3.A.1.1.22
TC HRGMv2_1190_10 HRGMv2_1190_10_63 61712 62551 - 3.A.1.1.45
TC HRGMv2_1190_10 HRGMv2_1190_10_64 62551 63405 - 3.A.1.1.45
TC HRGMv2_1190_10 HRGMv2_1190_10_65 63465 64808 - 3.A.1.1.45
TF HRGMv2_1190_10 HRGMv2_1190_10_66 65115 65834 - GntR
NULL(UNKNOWN) HRGMv2_1190_10 HRGMv2_1190_10_67 65918 66037 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1190_10 HRGMv2_1190_10_68 66059 68509 + 4.A.1.1.8
Gene ID: HRGMv2_1190_10_60
Type: CAZyme
Location: 56087 - 57592 (+)
Gene ID: HRGMv2_1190_10_61
Type: CAZyme
Location: 57721 - 59988 (+)
Gene ID: HRGMv2_1190_10_62
Type: TC
Location: 60444 - 61643 (-)
Gene ID: HRGMv2_1190_10_63
Type: TC
Location: 61712 - 62551 (-)
Gene ID: HRGMv2_1190_10_64
Type: TC
Location: 62551 - 63405 (-)
Gene ID: HRGMv2_1190_10_65
Type: TC
Location: 63465 - 64808 (-)
Gene ID: HRGMv2_1190_10_66
Type: TF
Location: 65115 - 65834 (-)
Gene ID: HRGMv2_1190_10_67
Type:
Location: 65918 - 66037 (-)
Gene ID: HRGMv2_1190_10_68
Type: TC
Location: 66059 - 68509 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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