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Cluster: HRGMv2_1128_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1128_3 HRGMv2_1128_3_59 81334 82716 - GH4
TC HRGMv2_1128_3 HRGMv2_1128_3_60 82720 84336 - 4.A.1.1.3
pfam HRGMv2_1128_3 HRGMv2_1128_3_61 84436 85302 - PRD | PRD | CAT_RBD
TC HRGMv2_1128_3 HRGMv2_1128_3_62 85309 85821 - 4.A.1.2.5
TC HRGMv2_1128_3 HRGMv2_1128_3_63 86271 88520 - 1.I.1.1.3
STP HRGMv2_1128_3 HRGMv2_1128_3_64 89027 89989 + FHA
STP HRGMv2_1128_3 HRGMv2_1128_3_65 90161 92245 + Pkinase
TC HRGMv2_1128_3 HRGMv2_1128_3_66 92496 94838 + 3.A.3.5.15
Gene ID: HRGMv2_1128_3_59
Type: CAZyme
Location: 81334 - 82716 (-)
Gene ID: HRGMv2_1128_3_60
Type: TC
Location: 82720 - 84336 (-)
Gene ID: HRGMv2_1128_3_61
Type: pfam
Location: 84436 - 85302 (-)
Gene ID: HRGMv2_1128_3_62
Type: TC
Location: 85309 - 85821 (-)
Gene ID: HRGMv2_1128_3_63
Type: TC
Location: 86271 - 88520 (-)
Gene ID: HRGMv2_1128_3_64
Type: STP
Location: 89027 - 89989 (+)
Gene ID: HRGMv2_1128_3_65
Type: STP
Location: 90161 - 92245 (+)
Gene ID: HRGMv2_1128_3_66
Type: TC
Location: 92496 - 94838 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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