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Cluster: HRGMv2_1128_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1128_27 HRGMv2_1128_27_3 1132 2508 - GH13_20
TC HRGMv2_1128_27 HRGMv2_1128_27_4 2663 3859 - 2.A.1.2.18
TC HRGMv2_1128_27 HRGMv2_1128_27_5 3980 6340 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1128_27 HRGMv2_1128_27_6 6462 6782 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1128_27 HRGMv2_1128_27_7 6830 7729 - S09.UPW
TC HRGMv2_1128_27 HRGMv2_1128_27_8 7976 8539 + 4.A.1.2.6
pfam HRGMv2_1128_27 HRGMv2_1128_27_9 8721 10124 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1128_27 HRGMv2_1128_27_10 10385 11170 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1128_27 HRGMv2_1128_27_11 11331 12311 + 3.A.1.34.1
TC HRGMv2_1128_27 HRGMv2_1128_27_12 12516 13439 + 3.A.1.34.1
TC HRGMv2_1128_27 HRGMv2_1128_27_13 13432 14226 + 3.A.1.34.1
TC HRGMv2_1128_27 HRGMv2_1128_27_14 14562 15329 + 1.A.23.4.2
pfam HRGMv2_1128_27 HRGMv2_1128_27_15 15423 17339 + Bmp
pfam HRGMv2_1128_27 HRGMv2_1128_27_16 17336 18046 + Metallophos | Metallophos_2
TC HRGMv2_1128_27 HRGMv2_1128_27_17 18172 18879 - 1.C.82.1.1
Gene ID: HRGMv2_1128_27_3
Type: CAZyme
Location: 1132 - 2508 (-)
Gene ID: HRGMv2_1128_27_4
Type: TC
Location: 2663 - 3859 (-)
Gene ID: HRGMv2_1128_27_5
Type: TC
Location: 3980 - 6340 (-)
Gene ID: HRGMv2_1128_27_6
Type:
Location: 6462 - 6782 (-)
Gene ID: HRGMv2_1128_27_7
Type: peptidase
Location: 6830 - 7729 (-)
Gene ID: HRGMv2_1128_27_8
Type: TC
Location: 7976 - 8539 (+)
Gene ID: HRGMv2_1128_27_9
Type: pfam
Location: 8721 - 10124 (+)
Gene ID: HRGMv2_1128_27_10
Type:
Location: 10385 - 11170 (+)
Gene ID: HRGMv2_1128_27_11
Type: TC
Location: 11331 - 12311 (+)
Gene ID: HRGMv2_1128_27_12
Type: TC
Location: 12516 - 13439 (+)
Gene ID: HRGMv2_1128_27_13
Type: TC
Location: 13432 - 14226 (+)
Gene ID: HRGMv2_1128_27_14
Type: TC
Location: 14562 - 15329 (+)
Gene ID: HRGMv2_1128_27_15
Type: pfam
Location: 15423 - 17339 (+)
Gene ID: HRGMv2_1128_27_16
Type: pfam
Location: 17336 - 18046 (+)
Gene ID: HRGMv2_1128_27_17
Type: TC
Location: 18172 - 18879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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