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Cluster: HRGMv2_1128_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1128_22 HRGMv2_1128_22_5 5375 6880 + GH77
CAZyme HRGMv2_1128_22 HRGMv2_1128_22_6 7009 9276 + GT35
TC HRGMv2_1128_22 HRGMv2_1128_22_7 9732 10931 - 3.A.1.1.22
TC HRGMv2_1128_22 HRGMv2_1128_22_8 11000 11839 - 3.A.1.1.45
TC HRGMv2_1128_22 HRGMv2_1128_22_9 11839 12693 - 3.A.1.1.45
TC HRGMv2_1128_22 HRGMv2_1128_22_10 12781 14097 - 3.A.1.1.45
TF HRGMv2_1128_22 HRGMv2_1128_22_11 14404 15123 - GntR
NULL(UNKNOWN) HRGMv2_1128_22 HRGMv2_1128_22_12 15207 15326 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1128_22 HRGMv2_1128_22_13 15348 17798 + 4.A.1.1.8
Gene ID: HRGMv2_1128_22_5
Type: CAZyme
Location: 5375 - 6880 (+)
Gene ID: HRGMv2_1128_22_6
Type: CAZyme
Location: 7009 - 9276 (+)
Gene ID: HRGMv2_1128_22_7
Type: TC
Location: 9732 - 10931 (-)
Gene ID: HRGMv2_1128_22_8
Type: TC
Location: 11000 - 11839 (-)
Gene ID: HRGMv2_1128_22_9
Type: TC
Location: 11839 - 12693 (-)
Gene ID: HRGMv2_1128_22_10
Type: TC
Location: 12781 - 14097 (-)
Gene ID: HRGMv2_1128_22_11
Type: TF
Location: 14404 - 15123 (-)
Gene ID: HRGMv2_1128_22_12
Type:
Location: 15207 - 15326 (-)
Gene ID: HRGMv2_1128_22_13
Type: TC
Location: 15348 - 17798 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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