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Cluster: HRGMv2_1128_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1128_5 HRGMv2_1128_5_68 77283 78527 + GH1
CAZyme HRGMv2_1128_5 HRGMv2_1128_5_69 78597 80024 + GH140
TF HRGMv2_1128_5 HRGMv2_1128_5_70 80641 81498 + HTH_6
CAZyme HRGMv2_1128_5 HRGMv2_1128_5_71 81571 82899 - GH4
NULL(UNKNOWN) HRGMv2_1128_5 HRGMv2_1128_5_72 82919 83188 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1128_5 HRGMv2_1128_5_73 83227 84789 - 4.A.1.1.16
STP HRGMv2_1128_5 HRGMv2_1128_5_74 85824 87854 + Pyr_redox_2
TF HRGMv2_1128_5 HRGMv2_1128_5_75 88304 88699 + 0039939
TC HRGMv2_1128_5 HRGMv2_1128_5_76 88880 91762 + 3.D.1.4.2
TC HRGMv2_1128_5 HRGMv2_1128_5_77 91775 92395 + 3.D.1.4.2
pfam HRGMv2_1128_5 HRGMv2_1128_5_78 92395 93111 + Complex1_30kDa
TC HRGMv2_1128_5 HRGMv2_1128_5_79 93117 94205 + 3.D.1.4.2
Gene ID: HRGMv2_1128_5_68
Type: CAZyme
Location: 77283 - 78527 (+)
Gene ID: HRGMv2_1128_5_69
Type: CAZyme
Location: 78597 - 80024 (+)
Gene ID: HRGMv2_1128_5_70
Type: TF
Location: 80641 - 81498 (+)
Gene ID: HRGMv2_1128_5_71
Type: CAZyme
Location: 81571 - 82899 (-)
Gene ID: HRGMv2_1128_5_72
Type:
Location: 82919 - 83188 (-)
Gene ID: HRGMv2_1128_5_73
Type: TC
Location: 83227 - 84789 (-)
Gene ID: HRGMv2_1128_5_74
Type: STP
Location: 85824 - 87854 (+)
Gene ID: HRGMv2_1128_5_75
Type: TF
Location: 88304 - 88699 (+)
Gene ID: HRGMv2_1128_5_76
Type: TC
Location: 88880 - 91762 (+)
Gene ID: HRGMv2_1128_5_77
Type: TC
Location: 91775 - 92395 (+)
Gene ID: HRGMv2_1128_5_78
Type: pfam
Location: 92395 - 93111 (+)
Gene ID: HRGMv2_1128_5_79
Type: TC
Location: 93117 - 94205 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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