dbCAN Logo

Cluster: HRGMv2_1111_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1111_13 HRGMv2_1111_13_86 100840 101283 + 4.A.6.1.16
pfam HRGMv2_1111_13 HRGMv2_1111_13_87 101283 101564 + YajC
TC HRGMv2_1111_13 HRGMv2_1111_13_88 101601 102083 + 4.A.6.1.4
TC HRGMv2_1111_13 HRGMv2_1111_13_89 102174 102974 + 4.A.6.1.4
TC HRGMv2_1111_13 HRGMv2_1111_13_90 102964 104046 + 4.A.6.1.4
TF HRGMv2_1111_13 HRGMv2_1111_13_91 104232 104963 + GntR
STP HRGMv2_1111_13 HRGMv2_1111_13_92 105078 106244 + SIS | SIS
CAZyme HRGMv2_1111_13 HRGMv2_1111_13_93 106362 107531 + CE9
Gene ID: HRGMv2_1111_13_86
Type: TC
Location: 100840 - 101283 (+)
Gene ID: HRGMv2_1111_13_87
Type: pfam
Location: 101283 - 101564 (+)
Gene ID: HRGMv2_1111_13_88
Type: TC
Location: 101601 - 102083 (+)
Gene ID: HRGMv2_1111_13_89
Type: TC
Location: 102174 - 102974 (+)
Gene ID: HRGMv2_1111_13_90
Type: TC
Location: 102964 - 104046 (+)
Gene ID: HRGMv2_1111_13_91
Type: TF
Location: 104232 - 104963 (+)
Gene ID: HRGMv2_1111_13_92
Type: STP
Location: 105078 - 106244 (+)
Gene ID: HRGMv2_1111_13_93
Type: CAZyme
Location: 106362 - 107531 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List