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Cluster: HRGMv2_1111_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1111_33 HRGMv2_1111_33_18 17519 18445 - CE7
TC HRGMv2_1111_33 HRGMv2_1111_33_19 18577 19404 - 3.A.1.5.27
TC HRGMv2_1111_33 HRGMv2_1111_33_20 19405 21420 - 3.A.1.5.25
TC HRGMv2_1111_33 HRGMv2_1111_33_21 21424 22380 - 3.A.1.5.38
TC HRGMv2_1111_33 HRGMv2_1111_33_22 22538 24151 - 3.A.1.5.27
pfam HRGMv2_1111_33 HRGMv2_1111_33_23 24515 26455 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1111_33 HRGMv2_1111_33_24 26462 28144 - 2.A.66.4.4
Gene ID: HRGMv2_1111_33_18
Type: CAZyme
Location: 17519 - 18445 (-)
Gene ID: HRGMv2_1111_33_19
Type: TC
Location: 18577 - 19404 (-)
Gene ID: HRGMv2_1111_33_20
Type: TC
Location: 19405 - 21420 (-)
Gene ID: HRGMv2_1111_33_21
Type: TC
Location: 21424 - 22380 (-)
Gene ID: HRGMv2_1111_33_22
Type: TC
Location: 22538 - 24151 (-)
Gene ID: HRGMv2_1111_33_23
Type: pfam
Location: 24515 - 26455 (-)
Gene ID: HRGMv2_1111_33_24
Type: TC
Location: 26462 - 28144 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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