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Cluster: HRGMv2_1111_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1111_25 HRGMv2_1111_25_11 10684 12243 + 2.A.2.5.1
CAZyme HRGMv2_1111_25 HRGMv2_1111_25_12 12359 13954 + GH28
peptidase HRGMv2_1111_25 HRGMv2_1111_25_13 14059 14868 + S09.UPW
CAZyme HRGMv2_1111_25 HRGMv2_1111_25_14 14865 17054 + CE19 | CE8
pfam HRGMv2_1111_25 HRGMv2_1111_25_15 17102 17770 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_1111_25 HRGMv2_1111_25_16 17878 19116 + GH105
Gene ID: HRGMv2_1111_25_11
Type: TC
Location: 10684 - 12243 (+)
Gene ID: HRGMv2_1111_25_12
Type: CAZyme
Location: 12359 - 13954 (+)
Gene ID: HRGMv2_1111_25_13
Type: peptidase
Location: 14059 - 14868 (+)
Gene ID: HRGMv2_1111_25_14
Type: CAZyme
Location: 14865 - 17054 (+)
Gene ID: HRGMv2_1111_25_15
Type: pfam
Location: 17102 - 17770 (+)
Gene ID: HRGMv2_1111_25_16
Type: CAZyme
Location: 17878 - 19116 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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