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Cluster: HRGMv2_1069_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1069_5 HRGMv2_1069_5_111 113314 113757 + 4.A.6.1.16
pfam HRGMv2_1069_5 HRGMv2_1069_5_112 113757 114038 + YajC
TC HRGMv2_1069_5 HRGMv2_1069_5_113 114075 114557 + 4.A.6.1.4
TC HRGMv2_1069_5 HRGMv2_1069_5_114 114648 115448 + 4.A.6.1.4
TC HRGMv2_1069_5 HRGMv2_1069_5_115 115438 116520 + 4.A.6.1.4
TF HRGMv2_1069_5 HRGMv2_1069_5_116 116706 117437 + GntR
STP HRGMv2_1069_5 HRGMv2_1069_5_117 117552 118718 + SIS | SIS
CAZyme HRGMv2_1069_5 HRGMv2_1069_5_118 118838 120007 + CE9
Gene ID: HRGMv2_1069_5_111
Type: TC
Location: 113314 - 113757 (+)
Gene ID: HRGMv2_1069_5_112
Type: pfam
Location: 113757 - 114038 (+)
Gene ID: HRGMv2_1069_5_113
Type: TC
Location: 114075 - 114557 (+)
Gene ID: HRGMv2_1069_5_114
Type: TC
Location: 114648 - 115448 (+)
Gene ID: HRGMv2_1069_5_115
Type: TC
Location: 115438 - 116520 (+)
Gene ID: HRGMv2_1069_5_116
Type: TF
Location: 116706 - 117437 (+)
Gene ID: HRGMv2_1069_5_117
Type: STP
Location: 117552 - 118718 (+)
Gene ID: HRGMv2_1069_5_118
Type: CAZyme
Location: 118838 - 120007 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1069_5_112 vegan > omnivore 1.16571 0.00455

🧭 Explore Read Mapping of CGC

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