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Cluster: HRGMv2_1066_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1066_19 HRGMv2_1066_19_28 26047 27552 + GH77
CAZyme HRGMv2_1066_19 HRGMv2_1066_19_29 27681 29948 + GT35
TC HRGMv2_1066_19 HRGMv2_1066_19_30 30404 31603 - 3.A.1.1.22
TC HRGMv2_1066_19 HRGMv2_1066_19_31 31672 32511 - 3.A.1.1.45
TC HRGMv2_1066_19 HRGMv2_1066_19_32 32511 33365 - 3.A.1.1.45
TC HRGMv2_1066_19 HRGMv2_1066_19_33 33453 34769 - 3.A.1.1.45
TF HRGMv2_1066_19 HRGMv2_1066_19_34 35076 35795 - GntR
NULL(UNKNOWN) HRGMv2_1066_19 HRGMv2_1066_19_35 35879 35998 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1066_19 HRGMv2_1066_19_36 36020 38470 + 4.A.1.1.8
Gene ID: HRGMv2_1066_19_28
Type: CAZyme
Location: 26047 - 27552 (+)
Gene ID: HRGMv2_1066_19_29
Type: CAZyme
Location: 27681 - 29948 (+)
Gene ID: HRGMv2_1066_19_30
Type: TC
Location: 30404 - 31603 (-)
Gene ID: HRGMv2_1066_19_31
Type: TC
Location: 31672 - 32511 (-)
Gene ID: HRGMv2_1066_19_32
Type: TC
Location: 32511 - 33365 (-)
Gene ID: HRGMv2_1066_19_33
Type: TC
Location: 33453 - 34769 (-)
Gene ID: HRGMv2_1066_19_34
Type: TF
Location: 35076 - 35795 (-)
Gene ID: HRGMv2_1066_19_35
Type:
Location: 35879 - 35998 (-)
Gene ID: HRGMv2_1066_19_36
Type: TC
Location: 36020 - 38470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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