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Cluster: HRGMv2_1066_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1066_9 HRGMv2_1066_9_53 54754 55923 - CE9
STP HRGMv2_1066_9 HRGMv2_1066_9_54 56042 57208 - SIS | SIS
TF HRGMv2_1066_9 HRGMv2_1066_9_55 57323 58054 - GntR
TC HRGMv2_1066_9 HRGMv2_1066_9_56 58239 59321 - 4.A.6.1.4
TC HRGMv2_1066_9 HRGMv2_1066_9_57 59311 60111 - 4.A.6.1.4
TC HRGMv2_1066_9 HRGMv2_1066_9_58 60202 60684 - 4.A.6.1.4
pfam HRGMv2_1066_9 HRGMv2_1066_9_59 60721 61002 - YajC
TC HRGMv2_1066_9 HRGMv2_1066_9_60 61002 61445 - 4.A.6.1.16
Gene ID: HRGMv2_1066_9_53
Type: CAZyme
Location: 54754 - 55923 (-)
Gene ID: HRGMv2_1066_9_54
Type: STP
Location: 56042 - 57208 (-)
Gene ID: HRGMv2_1066_9_55
Type: TF
Location: 57323 - 58054 (-)
Gene ID: HRGMv2_1066_9_56
Type: TC
Location: 58239 - 59321 (-)
Gene ID: HRGMv2_1066_9_57
Type: TC
Location: 59311 - 60111 (-)
Gene ID: HRGMv2_1066_9_58
Type: TC
Location: 60202 - 60684 (-)
Gene ID: HRGMv2_1066_9_59
Type: pfam
Location: 60721 - 61002 (-)
Gene ID: HRGMv2_1066_9_60
Type: TC
Location: 61002 - 61445 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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