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Cluster: HRGMv2_1066_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1066_7 HRGMv2_1066_7_28 35475 37151 + 3.A.1.5.35
TC HRGMv2_1066_7 HRGMv2_1066_7_29 37309 38346 + 3.A.1.5.37
TC HRGMv2_1066_7 HRGMv2_1066_7_30 38361 39296 + 3.A.1.5.11
TC HRGMv2_1066_7 HRGMv2_1066_7_31 39299 40390 + 3.A.1.5.37
TC HRGMv2_1066_7 HRGMv2_1066_7_32 40390 41418 + 3.A.1.5.36
STP HRGMv2_1066_7 HRGMv2_1066_7_33 42158 44503 + GAF | SpoIIE
STP HRGMv2_1066_7 HRGMv2_1066_7_34 44582 45328 + STAS
CAZyme HRGMv2_1066_7 HRGMv2_1066_7_35 46264 47997 + GH13_30
Gene ID: HRGMv2_1066_7_28
Type: TC
Location: 35475 - 37151 (+)
Gene ID: HRGMv2_1066_7_29
Type: TC
Location: 37309 - 38346 (+)
Gene ID: HRGMv2_1066_7_30
Type: TC
Location: 38361 - 39296 (+)
Gene ID: HRGMv2_1066_7_31
Type: TC
Location: 39299 - 40390 (+)
Gene ID: HRGMv2_1066_7_32
Type: TC
Location: 40390 - 41418 (+)
Gene ID: HRGMv2_1066_7_33
Type: STP
Location: 42158 - 44503 (+)
Gene ID: HRGMv2_1066_7_34
Type: STP
Location: 44582 - 45328 (+)
Gene ID: HRGMv2_1066_7_35
Type: CAZyme
Location: 46264 - 47997 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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