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Cluster: HRGMv2_1053_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1053_11 HRGMv2_1053_11_40 61552 62316 + 9.B.18.1.2
CAZyme HRGMv2_1053_11 HRGMv2_1053_11_41 62320 63237 + GT2
pfam HRGMv2_1053_11 HRGMv2_1053_11_42 63281 64552 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1053_11 HRGMv2_1053_11_43 64558 65850 + GT4
pfam HRGMv2_1053_11 HRGMv2_1053_11_44 65850 66797 + C5-epim_C
CAZyme HRGMv2_1053_11 HRGMv2_1053_11_45 66794 67897 + GT4
pfam HRGMv2_1053_11 HRGMv2_1053_11_46 67894 68982 + EpsG
pfam HRGMv2_1053_11 HRGMv2_1053_11_47 69126 70073 + ATPgrasp_TupA
TC HRGMv2_1053_11 HRGMv2_1053_11_48 70158 71624 + 2.A.66.2.23
Gene ID: HRGMv2_1053_11_40
Type: TC
Location: 61552 - 62316 (+)
Gene ID: HRGMv2_1053_11_41
Type: CAZyme
Location: 62320 - 63237 (+)
Gene ID: HRGMv2_1053_11_42
Type: pfam
Location: 63281 - 64552 (+)
Gene ID: HRGMv2_1053_11_43
Type: CAZyme
Location: 64558 - 65850 (+)
Gene ID: HRGMv2_1053_11_44
Type: pfam
Location: 65850 - 66797 (+)
Gene ID: HRGMv2_1053_11_45
Type: CAZyme
Location: 66794 - 67897 (+)
Gene ID: HRGMv2_1053_11_46
Type: pfam
Location: 67894 - 68982 (+)
Gene ID: HRGMv2_1053_11_47
Type: pfam
Location: 69126 - 70073 (+)
Gene ID: HRGMv2_1053_11_48
Type: TC
Location: 70158 - 71624 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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