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Cluster: HRGMv2_1053_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1053_10 HRGMv2_1053_10_51 64436 65185 + 9.B.18.1.2
CAZyme HRGMv2_1053_10 HRGMv2_1053_10_52 65172 65978 + GT26
pfam HRGMv2_1053_10 HRGMv2_1053_10_53 65971 67086 + Epimerase_2
pfam HRGMv2_1053_10 HRGMv2_1053_10_54 67079 68185 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_1053_10 HRGMv2_1053_10_55 68182 69261 + GT4
CAZyme HRGMv2_1053_10 HRGMv2_1053_10_56 69242 70000 + GT32
CAZyme HRGMv2_1053_10 HRGMv2_1053_10_57 69997 70917 + GT2
NULL(UNKNOWN) HRGMv2_1053_10 HRGMv2_1053_10_58 71136 72194 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1053_10 HRGMv2_1053_10_59 72196 73146 + GT2
Gene ID: HRGMv2_1053_10_51
Type: TC
Location: 64436 - 65185 (+)
Gene ID: HRGMv2_1053_10_52
Type: CAZyme
Location: 65172 - 65978 (+)
Gene ID: HRGMv2_1053_10_53
Type: pfam
Location: 65971 - 67086 (+)
Gene ID: HRGMv2_1053_10_54
Type: pfam
Location: 67079 - 68185 (+)
Gene ID: HRGMv2_1053_10_55
Type: CAZyme
Location: 68182 - 69261 (+)
Gene ID: HRGMv2_1053_10_56
Type: CAZyme
Location: 69242 - 70000 (+)
Gene ID: HRGMv2_1053_10_57
Type: CAZyme
Location: 69997 - 70917 (+)
Gene ID: HRGMv2_1053_10_58
Type:
Location: 71136 - 72194 (+)
Gene ID: HRGMv2_1053_10_59
Type: CAZyme
Location: 72196 - 73146 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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