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Cluster: HRGMv2_1053_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1053_4 HRGMv2_1053_4_40 56690 58072 - GH4
TC HRGMv2_1053_4 HRGMv2_1053_4_41 58076 59692 - 4.A.1.1.3
pfam HRGMv2_1053_4 HRGMv2_1053_4_42 59792 60658 - PRD | PRD | CAT_RBD
TC HRGMv2_1053_4 HRGMv2_1053_4_43 60665 61177 - 4.A.1.2.5
STP HRGMv2_1053_4 HRGMv2_1053_4_44 61521 62282 - Fer4
TC HRGMv2_1053_4 HRGMv2_1053_4_45 62903 65161 - 1.I.1.1.3
TC HRGMv2_1053_4 HRGMv2_1053_4_46 65722 68061 + 3.A.3.5.15
Gene ID: HRGMv2_1053_4_40
Type: CAZyme
Location: 56690 - 58072 (-)
Gene ID: HRGMv2_1053_4_41
Type: TC
Location: 58076 - 59692 (-)
Gene ID: HRGMv2_1053_4_42
Type: pfam
Location: 59792 - 60658 (-)
Gene ID: HRGMv2_1053_4_43
Type: TC
Location: 60665 - 61177 (-)
Gene ID: HRGMv2_1053_4_44
Type: STP
Location: 61521 - 62282 (-)
Gene ID: HRGMv2_1053_4_45
Type: TC
Location: 62903 - 65161 (-)
Gene ID: HRGMv2_1053_4_46
Type: TC
Location: 65722 - 68061 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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