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Cluster: HRGMv2_1053_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1053_18 HRGMv2_1053_18_11 15249 17699 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1053_18 HRGMv2_1053_18_12 17721 17840 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1053_18 HRGMv2_1053_18_13 17924 18643 + GntR
TC HRGMv2_1053_18 HRGMv2_1053_18_14 18950 20266 + 3.A.1.1.45
TC HRGMv2_1053_18 HRGMv2_1053_18_15 20354 21208 + 3.A.1.1.45
TC HRGMv2_1053_18 HRGMv2_1053_18_16 21208 22047 + 3.A.1.1.45
TC HRGMv2_1053_18 HRGMv2_1053_18_17 22116 23315 + 3.A.1.1.22
CAZyme HRGMv2_1053_18 HRGMv2_1053_18_18 23771 26038 - GT35
CAZyme HRGMv2_1053_18 HRGMv2_1053_18_19 26167 27672 - GH77
Gene ID: HRGMv2_1053_18_11
Type: TC
Location: 15249 - 17699 (-)
Gene ID: HRGMv2_1053_18_12
Type:
Location: 17721 - 17840 (+)
Gene ID: HRGMv2_1053_18_13
Type: TF
Location: 17924 - 18643 (+)
Gene ID: HRGMv2_1053_18_14
Type: TC
Location: 18950 - 20266 (+)
Gene ID: HRGMv2_1053_18_15
Type: TC
Location: 20354 - 21208 (+)
Gene ID: HRGMv2_1053_18_16
Type: TC
Location: 21208 - 22047 (+)
Gene ID: HRGMv2_1053_18_17
Type: TC
Location: 22116 - 23315 (+)
Gene ID: HRGMv2_1053_18_18
Type: CAZyme
Location: 23771 - 26038 (-)
Gene ID: HRGMv2_1053_18_19
Type: CAZyme
Location: 26167 - 27672 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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